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Heterogeneous Occupancy and Density Estimates of the Pathogenic Fungus Batrachochytrium dendrobatidis in Waters of North America

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Title Heterogeneous Occupancy and Density Estimates of the Pathogenic Fungus Batrachochytrium dendrobatidis in Waters of North America
Names Chestnut, Tara (creator)
Anderson, Chauncey (creator)
Popa, Radu (creator)
Blaustein, Andrew R. (creator)
et al. (creator)
Date Issued 2014-09-15 (iso8601)
Note To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The article was published by the Public Library of Science and is in the public domain. The published article can be found at: http://www.plosone.org/.
Abstract Biodiversity losses are occurring worldwide due to a combination of stressors. For example, by one estimate, 40% of
amphibian species are vulnerable to extinction, and disease is one threat to amphibian populations. The emerging
infectious disease chytridiomycosis, caused by the aquatic fungus Batrachochytrium dendrobatidis (Bd), is a contributor to
amphibian declines worldwide. Bd research has focused on the dynamics of the pathogen in its amphibian hosts, with little
emphasis on investigating the dynamics of free-living Bd. Therefore, we investigated patterns of Bd occupancy and density
in amphibian habitats using occupancy models, powerful tools for estimating site occupancy and detection probability.
Occupancy models have been used to investigate diseases where the focus was on pathogen occurrence in the host. We
applied occupancy models to investigate free-living Bd in North American surface waters to determine Bd seasonality,
relationships between Bd site occupancy and habitat attributes, and probability of detection from water samples as a
function of the number of samples, sample volume, and water quality. We also report on the temporal patterns of Bd
density from a 4-year case study of a Bd-positive wetland. We provide evidence that Bd occurs in the environment year-round.
Bd exhibited temporal and spatial heterogeneity in density, but did not exhibit seasonality in occupancy. Bd was
detected in all months, typically at less than 100 zoospores L⁻¹. The highest density observed was ~3 million zoospores
L⁻¹. We detected Bd in 47% of sites sampled, but estimated that Bd occupied 61% of sites, highlighting the importance of
accounting for imperfect detection. When Bd was present, there was a 95% chance of detecting it with four samples of
600 ml of water or five samples of 60 mL. Our findings provide important baseline information to advance the study of Bd
disease ecology, and advance our understanding of amphibian exposure to free-living Bd in aquatic habitats over time.
Genre Article
Access Condition http://creativecommons.org/publicdomain/zero/1.0/
Identifier Chestnut T, Anderson C, Popa R, Blaustein AR, Voytek M, et al. (2014) Heterogeneous Occupancy and Density Estimates of the Pathogenic Fungus Batrachochytrium dendrobatidis in Waters of North America. PLoS ONE 9(9): e106790. doi:10.1371/journal.pone.0106790

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