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Effect of inventory method on niche models: Random versus systematic error

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Title Effect of inventory method on niche models: Random versus systematic error
Names Lintz, Heather E. (creator)
Gray, Andrew N. (creator)
McCune, Bruce (creator)
Date Issued 2013-11 (iso8601)
Note To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The published article is copyrighted by Elsevier and can be found at: http://www.journals.elsevier.com/ecological-informatics/.
Abstract Data from large-scale biological inventories are essential for understanding and managing Earth's ecosystems.
The Forest Inventory and Analysis Program (FIA) of the U.S. Forest Service is the largest biological inventory in
North America; however, the FIA inventory recently changed from an amalgam of different approaches to a
nationally-standardized approach in 2000. Full use of both data sets is clearly warranted to target many pressing
research questions including those related to climate change and forest resources. However, full use requires
lumping FIA data from different regionally-based designs (pre-2000) and/or lumping the data across the temporal
changeover. Combining data from different inventory types must be approached with caution as inventory
types represent different probabilities of detecting trees per sample unit, which can ultimately confound temporal
and spatial patterns found in the data. Consequently, the main goal of this study is to evaluate the effect of
inventory on a common analysis in ecology, modeling of climatic niches (or species-climate relations). We use
non-parametric multiplicative regression (NPMR) to build and compare niche models for 41 tree species from
the old and new FIA design in the Pacific coastal United States. We discover two likely effects of inventory on
niche models and their predictions. First, there is an increase from 4 to 6% in random error for modeled predictions
from the different inventories when compared to modeled predictions from two samples of the same
inventory. Second, systematic error (or directional disagreement among modeled predictions) is detectable
for 4 out of 41 species among the different inventories: Calocedrus decurrens, Pseudotsuga menziesii, and
Pinus ponderosa, and Abies concolor. Hence, at least 90% of niche models and predictions of probability of occurrence
demonstrate no obvious effect from the change in inventory design. Further, niche models built from
sub-samples of the same data set can yield systematic error that rivals systematic error in predictions
for models built from two separate data sets. This work corroborates the pervasive and pressing need
to quantify different types of error in niche modeling to address issues associated with data quality and
large-scale data integration.
Genre Article
Topic Niche model
Identifier Lintz, H. E., Gray, A. N., & McCune, B. (2013). Effect of inventory method on niche models: Random versus systematic error. Ecological Informatics, 18, 20-34. doi:10.1016/j.ecoinf.2013.05.001

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